PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv7_156860_hqwy.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family WRKY
Protein Properties Length: 327aa    MW: 37391.9 Da    PI: 6.4111
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv7_156860_hqwy.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.31.8e-24121181259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         dDgy+WrKYGqKe+ ++++pr+YYrCt++   +C+++k+v++ +e+p+  +i+Y+g+H+++
  Bv7_156860_hqwy.t1 121 DDGYAWRKYGQKEILNTKYPRNYYRCTHKhdqECQATKQVQQISENPNKYNIIYHGTHTCK 181
                         8***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-24110182IPR003657WRKY domain
SuperFamilySSF1182903.27E-23114181IPR003657WRKY domain
PROSITE profilePS5081119.589115178IPR003657WRKY domain
SMARTSM007741.0E-34120182IPR003657WRKY domain
PfamPF031067.3E-24121181IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MKQGQESAQQ IRSFFHGKLG LLKVEDDIVC DDNNHHQNDV NHHSLVTLES FEKCLNLLKT  60
YDFDHQSYDL NRKRKISSIH DLKCPKSEDI SGGTLPKERR GSYKRRRTGQ SWTVEATNLT  120
DDGYAWRKYG QKEILNTKYP RNYYRCTHKH DQECQATKQV QQISENPNKY NIIYHGTHTC  180
KNHHNNPTII MESPEENSSI FLSFETNNYT TAKHGLNTSL FPSSTTNTTT IKQEYTSIKV  240
DSPCGPHDLD HQLSGTHNQY SSSSDVPSCS DLTSTGLSST PVSDQSDVIS STEIYSSTPT  300
SCDIGQDYAH LFFEEYYTNL EELFSYP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A9e-21113181269OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010683475.10.0PREDICTED: probable WRKY transcription factor 62
TrEMBLA0A0K9QFD51e-113A0A0K9QFD5_SPIOL; Uncharacterized protein
STRINGXP_010683475.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-29WRKY DNA-binding protein 70