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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Bv6_153540_qoyx.t1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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| Family |
NAC |
| Protein Properties |
Length: 274aa MW: 31507.8 Da PI: 9.099 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bv6_153540_qoyx.t1 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 174 | 4.4e-54 | 11 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+ +yLk+++ +k++++ ++i+e+diyk++Pw+Lp k+ +e+ewyfF++rd+ky++g r+nrat sgyWkatg+dk+
Bv6_153540_qoyx.t1 11 LPPGFRFHPTDEELIIHYLKNQAMSKPCPV-SIIPEIDIYKFDPWQLPDKAVFGENEWYFFTPRDRKYPNGIRPNRATLSGYWKATGTDKS 100
79****************************.89***************7777899************************************ PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++s + + vg+kk Lvfykgr pkg+ktdW+mheyrl
Bv6_153540_qoyx.t1 101 IYS-GAKYVGIKKALVFYKGRPPKGSKTDWIMHEYRL 136
***.999****************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MDAKRCSSNN LPPGFRFHPT DEELIIHYLK NQAMSKPCPV SIIPEIDIYK FDPWQLPDKA 60
VFGENEWYFF TPRDRKYPNG IRPNRATLSG YWKATGTDKS IYSGAKYVGI KKALVFYKGR 120
PPKGSKTDWI MHEYRLTETK HLPIKQHGSM RLDDWVLCRI YKKRHVVRVE EKTEELASPQ 180
GQLSIGGESN VSSDQNQQPL KFPRSQSLSY LLDLDYLGPI AHLLNDNTSY NESFDHQTSM 240
GSNVIMDPNM GPILSYPNTI GLSYHQINGN PFYK
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-72 | 10 | 164 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-72 | 10 | 164 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-72 | 10 | 164 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-72 | 10 | 164 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-72 | 10 | 164 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 1e-72 | 10 | 164 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 1e-72 | 10 | 164 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 1e-72 | 10 | 164 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 1e-72 | 10 | 164 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 1e-72 | 10 | 164 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 1e-72 | 10 | 164 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 1e-72 | 10 | 164 | 19 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 1e-72 | 10 | 164 | 16 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 1e-72 | 10 | 164 | 16 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence (developmental, light-induced and ABA-induced senescence) and regulates fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. Activates the expression of senescence and ABA associated genes including NCED1, ABCG40, CYP707A2, SAG113, SGR1 and PAO, by directly binding to their promoters. {ECO:0000269|PubMed:29760199}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. Induced by abscisic acid (ABA). {ECO:0000269|PubMed:29760199}. |
