PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv6_137710_nyuw.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family BES1
Protein Properties Length: 320aa    MW: 34179 Da    PI: 9.2535
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv6_137710_nyuw.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822224.61.9e-6931461148
              DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91 
                         g++gr ptwkErEnnk+RERrRRaiaaki++GLRaqG yklpk++DnneVlkALcreAGw+ve+DGttyrkg++p+  +++ag+sa++s +
  Bv6_137710_nyuw.t1   3 GATGRLPTWKERENNKKRERRRRAIAAKIFTGLRAQGSYKLPKHCDNNEVLKALCREAGWIVEEDGTTYRKGCNPP-PMDMAGTSANISAC 92 
                         5899************************************************************************.************** PP

              DUF822  92 sslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvss 148
                         sslq+s++ssa +sp++sy+asp+sssfpsps++ds+++   + llp+l++l++++ 
  Bv6_137710_nyuw.t1  93 SSLQQSPQSSAYPSPIPSYHASPTSSSFPSPSRYDSNPS---NYLLPFLRNLASIPT 146
                         *************************************98...599999999988665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056877.8E-645128IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MGGATGRLPT WKERENNKKR ERRRRAIAAK IFTGLRAQGS YKLPKHCDNN EVLKALCREA  60
GWIVEEDGTT YRKGCNPPPM DMAGTSANIS ACSSLQQSPQ SSAYPSPIPS YHASPTSSSF  120
PSPSRYDSNP SNYLLPFLRN LASIPTNLPP IRISSSAPVT PPLSSPTSRS SKRKADWESL  180
SNSNGSGSQQ SAHHTAFAVS APSSPTRRNN ITPTIPECDE SDASTVDSGR WVSFQTGATL  240
GSPSSPTFNL VKQAVAQRSS MQGALNGSVA LGWGGAMERG HGPEFEFGNG AAVMAWEGER  300
IHEVGVDDLE LTLGSAKARC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-29786372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-29786372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-29786372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-29786372451Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010680895.10.0PREDICTED: BES1/BZR1 homolog protein 2
SwissprotQ94A431e-109BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A0K9R4T90.0A0A0K9R4T9_SPIOL; Uncharacterized protein
STRINGXP_010680895.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.25e-74BES1 family protein