PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Bv6_134670_tkgt.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

Dof

Protein Properties

Length: 385aa MW: 40498.4 Da PI: 8.6577

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv6_134670_tkgt.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.8	2.8e-39	84	142	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCdstntkfCyynny+l+qPr+fCk+CrryWtkGG+lrnvP+Ggg+rknk++ Bv6_134670_tkgt.t1 84 QQNLRCPRCDSTNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGTLRNVPIGGGCRKNKST 142 7899****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-26	80	140	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.1E-33	85	141	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.45	87	141	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	89	125	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence Send to blast
MIQELLGGNS APTSFLGERK ISIPFSSPPS TTCPSTTPIL TTTTTSIATT TASAATLANA 60 SNSASSGGGG NGGNNNSTEV NASQQNLRCP RCDSTNTKFC YYNNYNLTQP RHFCKTCRRY 120 WTKGGTLRNV PIGGGCRKNK STTVSGSNGS SGFAKSSTNA MAKAKATLST ELLVNGNHGY 180 LGNGLLDHLH HHSELQSSCP NNNNPILWPS LPQNSHILSL LRGSNQFHNP NPNPNPLSSV 240 YSCVKTEGSN SNTTITLGLD SYGNGASSLL GSYPRSNNQH QVNGFSSGVQ DYVQQNGNSS 300 NILELYQRLK SSSNYSSYCG NENSGTAILG NMVGSTSPSS PMHTTILDSA PVGGADNYGG 360 YSFMTSPGMS GWSEYPIVPI NGAYP

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence Send to blast

MIQELLGGNS APTSFLGERK ISIPFSSPPS TTCPSTTPIL TTTTTSIATT TASAATLANA  60
SNSASSGGGG NGGNNNSTEV NASQQNLRCP RCDSTNTKFC YYNNYNLTQP RHFCKTCRRY  120
WTKGGTLRNV PIGGGCRKNK STTVSGSNGS SGFAKSSTNA MAKAKATLST ELLVNGNHGY  180
LGNGLLDHLH HHSELQSSCP NNNNPILWPS LPQNSHILSL LRGSNQFHNP NPNPNPLSSV  240
YSCVKTEGSN SNTTITLGLD SYGNGASSLL GSYPRSNNQH QVNGFSSGVQ DYVQQNGNSS  300
NILELYQRLK SSSNYSSYCG NENSGTAILG NMVGSTSPSS PMHTTILDSA PVGGADNYGG  360
YSFMTSPGMS GWSEYPIVPI NGAYP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010680457.1	0.0	PREDICTED: dof zinc finger protein PBF
TrEMBL	A0A0K9R6D7	1e-115	A0A0K9R6D7_SPIOL; Uncharacterized protein
STRING	XP_010680457.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	3e-34	TARGET OF MONOPTEROS 6