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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Bv5_115440_dggo.t1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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| Family |
LBD |
| Protein Properties |
Length: 268aa MW: 30733.2 Da PI: 6.7887 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bv5_115440_dggo.t1 | genome | TBVR | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 124.8 | 4.4e-39 | 10 | 108 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
aCaaCk++rrkC++ C+lapyfp +q+k f+nvhklFG+++++kllk l+++++++amss++y+A++r r PvyG+v+vi++l++q++q +
Bv5_115440_dggo.t1 10 ACAACKYQRRKCTSTCPLAPYFPPDQHKMFQNVHKLFGVKKIQKLLKLLHPSQHNEAMSSIIYQANIRERSPVYGCVEVIQHLRNQIRQCE 100
7****************************************************************************************** PP
DUF260 92 aelallke 99
+el ++++
Bv5_115440_dggo.t1 101 EELYAVHS 108
**998876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MTLKGGNNQA CAACKYQRRK CTSTCPLAPY FPPDQHKMFQ NVHKLFGVKK IQKLLKLLHP 60
SQHNEAMSSI IYQANIRERS PVYGCVEVIQ HLRNQIRQCE EELYAVHSML NTYRHQHDHQ 120
QISTNVVSFT DINSASQLQL GMGPPSNIIP SFYNQNTAVL QQHYNSENVV PLSQNHSYSS 180
SSSPYHSSYL DVKEPLLNSM WIQHPGIHDN TNSENENAIP IQSELVITSE SPAFQENAFQ 240
DYNDMHPYFD TIDDRQSYID SKVAYDSR
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