 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Bv4_096650_oxms.t1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
|
| Family |
NAC |
| Protein Properties |
Length: 241aa MW: 27619.8 Da PI: 5.3795 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bv4_096650_oxms.t1 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 181 | 3.1e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
lppGfrFhPtdeelv +yLk+k++g+k++l e+i+e+d+y++ePw+Lp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWk+tgkd
Bv4_096650_oxms.t1 6 LPPGFRFHPTDEELVAYYLKRKINGHKIDL-EIIPEIDLYQFEPWELPsKsLLPSNDLEWYFFSPRDRKYPNGSRTNRATKAGYWKSTGKD 95
79****************************.99***************5334455677********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++v s + ++vg+kktLv+y+grap+g++tdWvmheyrl
Bv4_096650_oxms.t1 96 RKVNS-QMRAVGMKKTLVYYQGRAPNGHRTDWVMHEYRL 133
*****.9999***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MAPVALPPGF RFHPTDEELV AYYLKRKING HKIDLEIIPE IDLYQFEPWE LPSKSLLPSN 60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK STGKDRKVNS QMRAVGMKKT LVYYQGRAPN 120
GHRTDWVMHE YRLDEGECEI ASGLQDAYAL CRVFKKTPTT ISNNIATSPQ EHSFTSIVQM 180
ASDQSSSIDI YSEGRCDDFE SSDYSVPIER CSTSFTHGSS SSLCDIGDGQ WMQYLNEEEF 240
C
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-59 | 1 | 156 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-59 | 1 | 156 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-59 | 1 | 156 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-59 | 1 | 156 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-59 | 1 | 156 | 15 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 1e-59 | 1 | 156 | 15 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 1e-59 | 1 | 156 | 15 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 1e-59 | 1 | 156 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 1e-59 | 1 | 156 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 1e-59 | 1 | 156 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 1e-59 | 1 | 156 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 1e-59 | 1 | 156 | 15 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 1e-59 | 1 | 156 | 12 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 1e-59 | 1 | 156 | 12 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC045, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}. |
