 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Bv4_087410_qejj.t1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
|
| Family |
NAC |
| Protein Properties |
Length: 410aa MW: 46041.4 Da PI: 7.9104 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bv4_087410_qejj.t1 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 176.1 | 9.5e-55 | 24 | 150 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeelvv+yLk+kv++++l++ ++i+evd+yk++Pw+Lp k+ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+
Bv4_087410_qejj.t1 24 LPPGFRFHPTDEELVVHYLKRKVQSTSLPV-SIIAEVDLYKFDPWELPDKAVFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKP 113
79****************************.89***************7777899************************************ PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
vls+++++vg+kk Lvfy g+ p+g+kt+W+mheyrl
Bv4_087410_qejj.t1 114 VLSSGSQKVGVKKALVFYGGKPPRGVKTNWIMHEYRL 150
***********************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MDNTHSPATG GSHHPPEPPP QPHLPPGFRF HPTDEELVVH YLKRKVQSTS LPVSIIAEVD 60
LYKFDPWELP DKAVFGEQEW YFFSPRDRKY PNGARPNRAA TSGYWKATGT DKPVLSSGSQ 120
KVGVKKALVF YGGKPPRGVK TNWIMHEYRL VDNKPNNKPP AYDLCHNKKG SLRLDDWVLC 180
RIYKKNNTNR PMDHEREDSM EDMMMMGTPM SMSMSMSMPS SISNMGQHHH LHNHHPLTKV 240
TGSLNYTSLL DSHVDDQHGI YEGMMGGHAM DPPTNISHMP LKRTLPSLYW GGNDHNTGGD 300
IGCSHSPSKR LSMLQMSNEA NNNNNNNNNN NTKIAGNNNS SEESGARSDH HVNNNNNNNN 360
NNMSSMSSLL NQLPSEIPPP LHQQQQPMLG SLSDGVFRQP YPLPGLNWYS
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 7e-77 | 11 | 188 | 1 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 7e-77 | 11 | 188 | 1 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 7e-77 | 11 | 188 | 1 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 7e-77 | 11 | 188 | 1 | 168 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 7e-77 | 11 | 188 | 1 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 7e-77 | 11 | 188 | 1 | 168 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor of the NAC family (Probable). Together with NAC018/NARS2, regulates embryogenesis by regulating the development and degeneration of ovule integuments, a process required for intertissue communication between the embryo and the maternal integument (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By Jasmonic acid (JA). {ECO:0000269|PubMed:16805732}. |
