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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Bv2_036550_qhra.t1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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| Family |
LBD |
| Protein Properties |
Length: 237aa MW: 25287.3 Da PI: 6.4941 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bv2_036550_qhra.t1 | genome | TBVR | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 135.3 | 2.3e-42 | 59 | 158 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+CaaCk+lrr+Ca++Cvlapyfp ++p kf ++hk+FGasn++kll++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q++ l+
Bv2_036550_qhra.t1 59 PCAACKILRRRCADKCVLAPYFPPTDPLKFTIAHKVFGASNIIKLLQDLPESQRADAVSSMVYEANARLRDPVYGCAGAICQLQKQVSDLQ 149
7****************************************************************************************** PP
DUF260 92 aelallkee 100
aela+ ++e
Bv2_036550_qhra.t1 150 AELAKSRAE 158
****99886 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MESNYSSDKM MYSSPGATST PPPGSPQSPN SPPSGHGHGY GHGHGHGHGV GGAPVIMSPC 60
AACKILRRRC ADKCVLAPYF PPTDPLKFTI AHKVFGASNI IKLLQDLPES QRADAVSSMV 120
YEANARLRDP VYGCAGAICQ LQKQVSDLQA ELAKSRAEIV NMQCQQANLL ALICMEMTTQ 180
SQDHAMIPVS ASSPQSGGSS DSGAYEIGAN NSNNNNNFLS FYDDNNSLNS IWEPLWT
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