PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv2_032900_urkh.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family ERF
Protein Properties Length: 141aa    MW: 16044.5 Da    PI: 10.8619
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv2_032900_urkh.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.48.5e-14754154
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                        s+++GV   +++g+W+A+I +      rkr +lg++ t+ +Aa a+++a +kl 
  Bv2_032900_urkh.t1  7 SRFRGVI-SRRTGKWEAQITVD-----RKRLWLGTYETEVDAAIAYDRASLKLL 54
                        789***4.5569*********4.....5**********99*********99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.3E-8753IPR001471AP2/ERF domain
CDDcd000181.03E-17762No hitNo description
SuperFamilySSF541712.48E-15763IPR016177DNA-binding domain
SMARTSM003801.4E-14868IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-17862IPR001471AP2/ERF domain
PROSITE profilePS5103215.606864IPR001471AP2/ERF domain
PRINTSPR003672.0E-5920IPR001471AP2/ERF domain
PRINTSPR003672.0E-52945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MEGGQASRFR GVISRRTGKW EAQITVDRKR LWLGTYETEV DAAIAYDRAS LKLLRFSSLN  60
FPFTVRTPLE MQFQSMYPFE TIISMIKNRT YAYFLGYKAN LARSYLPGVR SGQRRIVNAG  120
IGGGPRNEVH EPVMLFGARI G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010677110.11e-48PREDICTED: AP2/ERF and B3 domain-containing transcription factor At1g50680
TrEMBLA0A0K9RHZ16e-36A0A0K9RHZ1_SPIOL; Uncharacterized protein
STRINGXP_010668824.11e-100(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.14e-21RAV family protein