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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Bv1_018470_kcda.t2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
|
| Family |
bHLH |
| Protein Properties |
Length: 495aa MW: 54292.3 Da PI: 7.8631 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bv1_018470_kcda.t2 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 48.8 | 1.3e-15 | 290 | 336 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq
Bv1_018470_kcda.t2 290 VHNQSERKRRDKINQRMKTLQKLVPNS-----NKADKASMLDEVIEYLKQLQ 336
6*************************7.....5******************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
| GO:0009506 | Cellular Component | plasmodesma |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 495 aa
Download sequence Send
to blast |
MNHHHCVPTW TNNLEDEIPP PPPPPSYPPL SRVLPSQSIS TSLSVGPDSS MLDYEMAELT 60
WENGQLAMHG LGLPRVSSKS NLADAVAWTD KLYTRASGTL ESIVDQAYHN QEPSPMAARR 120
GAWKHDEDDV VPWFGPKTTA PVPVTLDALV PSNNMVGCST RVESCSTAAR VPLGSDWSVS 180
VSASASASES TRKKGHAEDT CEQLRSMNNN NGFTSTSFGQ VSPENTKTFT VDEHDSACHS 240
RPQLSSSLKS KKSHPISRKK KRERGEEEEN QKQGTEKSGV STKRSRAAAV HNQSERKRRD 300
KINQRMKTLQ KLVPNSNKAD KASMLDEVIE YLKQLQAQVQ MLSRMSLPSM MMPLAIQHQL 360
QMSMMAPMGM GMGMGMGMGM DQMNMSMNPM GHPNMAGMNP ALMNLAAAYN MPPLAPTSDG 420
AASRGGGDCI LPQGNMVQTD PLSTYLACQS LPMTMDAYSR MTAIYQQLQQ QQTQQQQQQQ 480
QQRLNQQQAG PSSNI
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 294 | 299 | ERKRRD |
| 2 | 295 | 300 | RKRRDK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Required during the fertilization of ovules by pollen. {ECO:0000269|PubMed:15634699}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cold treatment. {ECO:0000269|PubMed:12679534}. |
