PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv1_006750_ogru.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family TALE
Protein Properties Length: 449aa    MW: 50350.4 Da    PI: 6.4712
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv1_006750_ogru.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.85.1e-103794161954
                         HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         Fe   ++yp+ +e+  LA+++gLt++qV++WF N R +
  Bv1_006750_ogru.t1 379 FEHflHPYPNDSEKLTLASQTGLTKNQVSNWFINARVR 416
                         664459******************************88 PP
2BELL95.93.6e-31239309272
                BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         +++lq+k++kL++lle+V+ +Y  y+++++ ++ssFe++ag  +ak Yt+lAl+a+SrhF +L+dai+ qi
  Bv1_006750_ogru.t1 239 KHDLQIKISKLITLLEQVEGKYDEYCQKMEELMSSFEVIAGESAAKCYTALALQAMSRHFCSLRDAIVTQI 309
                         789******************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005744.2E-25176307IPR006563POX domain
PfamPF075269.2E-34182306IPR006563POX domain
PROSITE profilePS5007112.05357420IPR001356Homeobox domain
SMARTSM003895.3E-10360424IPR001356Homeobox domain
CDDcd000863.25E-12360421No hitNo description
Gene3DG3DSA:1.10.10.602.1E-27365426IPR009057Homeodomain-like
SuperFamilySSF466891.45E-17366428IPR009057Homeodomain-like
PfamPF059205.1E-17377416IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MNMVSQETHT NPTSSSSLHH FIISNPITSQ THFENPHFDA YGSEINIRVS SNNPFSDHQS  60
LGTTQFPTIQ SLGERMSRSI NLVHHDPSSV VVHPDDHSDM GHTRHLMDLL GASNEPTHGS  120
NRLSLSLGSQ VLHTPQYRQR ALSSDLIHQA YNNLVSSSGD HETCNPGDYS YMANSSFTAF  180
SISNSVYLKP AQSILEEVVD LGSKDIELND VKRLFMSSRG LCAELRAELM SNSFLSADKH  240
DLQIKISKLI TLLEQVEGKY DEYCQKMEEL MSSFEVIAGE SAAKCYTALA LQAMSRHFCS  300
LRDAIVTQIK VARKKLSPDL PKIGSGLSHL SLFDRESRNS NSRMSLQQIG LIQGAHRQAW  360
RPIRGLPETS VAILRAWLFE HFLHPYPNDS EKLTLASQTG LTKNQVSNWF INARVRLWKP  420
MIEEMYKEEF GDSSVDSSGE CHSERAEDQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A9e-17366424563Homeobox protein Meis2
3k2a_B9e-17366424563Homeobox protein Meis2
4xrs_A7e-17366423158Homeobox protein Meis1
4xrs_B7e-17366423158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010672774.10.0PREDICTED: BEL1-like homeodomain protein 11
SwissprotQ1PFD11e-102BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLA0A0K9QNJ90.0A0A0K9QNJ9_SPIOL; Uncharacterized protein
STRINGXP_010672774.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.11e-104BEL1-like homeodomain 11