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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Bv1_005490_zgmm.t1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family |
GATA |
Protein Properties |
Length: 346aa MW: 37719.9 Da PI: 5.8033 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bv1_005490_zgmm.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 51 | 2e-16 | 199 | 235 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+
Bv1_005490_zgmm.t1 199 CQHCGVSEndTPAMRRGPAGPRTLCNACGLMWANKGT 235
**********************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005515 | Molecular Function | protein binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MAANPKPLQS RPYEEDVPVD GEEFGESDGD ESTDDGIDED QTVRMRREKR GVGIYVGPSS 60 SSRTSELTLS FEGEVFVFPA VTPEKVKAVL LLLGGRDNHV GVPTVEVACG QDNRVTGSPT 120 RSNVSNRIAS LVRFREKRKE RCYDNRIRYT IRKEVAQRMH RKNGQFASLR EGSASSNLEA 180 KKNLPNGGTL GPESVSNKCQ HCGVSENDTP AMRRGPAGPR TLCNACGLMW ANKGTLRNLS 240 RARRSFILDE AELGSLVDRK PSIVEENSHA NPCKLRTLKG ETSAVTIAYV NSFAEPRKEN 300 SHGIADATSM LTEIAVDSSG NFDKQDTLAE LDDSSGTDID IAANSD
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}. |