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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast09G133100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | NAC | ||||||||
Protein Properties | Length: 240aa MW: 26180.3 Da PI: 8.711 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 36.6 | 1.3e-11 | 12 | 150 | 2 | 128 |
NAM 2 ppGfrF.hPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk.....kvkaeekew.yfFskrdkkyatgkrknratksg 81 ppG F +P+ +++++yL++k+ + ++ +v + vd++++ P+ Lp ++ + + w yfF+ r + r + g Brast09G133100.1.p 12 PPGHAFtKPRGRQIITQYLAPKALHGGrgafFPG-HVAEGVDVFSASPEALPFhpscnRTPRNGDVWgYFFAARPAG------NARPVPGG 95 78999956**************887775664444.678999**********95476554444566889999998774......4688899* PP NAM 82 yWkatgkdkevlsk..kgelvglkktLvfy......kgrapkgektdWvmheyrl 128 W g dk + +++v ++ ++f+ +g ++ t W+m+eyrl Brast09G133100.1.p 96 CWVRYGPDKGYGHGgdPQAAVAFRRRFAFHvtwlrgDGGGVASVPTPWLMKEYRL 150 **********9997555566**********99887767788889*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.1E-19 | 4 | 177 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-9 | 12 | 150 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 18.678 | 12 | 177 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MASTAVRTPQ PPPGHAFTKP RGRQIITQYL APKALHGGRG AFFPGHVAEG VDVFSASPEA 60 LPFHPSCNRT PRNGDVWGYF FAARPAGNAR PVPGGCWVRY GPDKGYGHGG DPQAAVAFRR 120 RFAFHVTWLR GDGGGVASVP TPWLMKEYRL NKGAPAFRAG PWAAANMDCV VCKVFRKPVV 180 HPPPFVSDDD DEVLPDSSYP SEDEEEADDY YSSDEDQERK RVGCSIEGRA TKRARFGRH* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast09G133100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010227184.1 | 1e-119 | uncharacterized protein LOC104581393 | ||||
TrEMBL | A0A0Q3H557 | 1e-147 | A0A0Q3H557_BRADI; Uncharacterized protein | ||||
STRING | BRADI5G14740.1 | 1e-150 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12891 | 22 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76420.1 | 6e-08 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Brast09G133100.1.p |