PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast09G117600.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 863aa    MW: 94595.6 Da    PI: 10.5351
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast09G117600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.51e-09111452128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkklelee......vikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyW 83 
                         +pG  F+ +  +l++ yL +k+ + +l+ +       v + vdi+ + P+ Lp   +++a ++  w +Fs ++ ++     + + +  g W
  Brast09G117600.1.p  11 APGNVFKVSGRQLITLYLSHKALSGELSNAIlpggcsVEAGVDIFAASPHALPFvpSHRApHDVVWGYFSAEQPAE-----HIQPAPGGCW 96 
                         78999999**************99996554455665456788**********953422222555898888887764.....3344578*** PP

                 NAM  84 katgkdkevlskkgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
                            g +k+ +  +ge+ g +  ++f+     + r+     t W m+eyrl
  Brast09G117600.1.p  97 VRYGAEKRYMI-NGEELGYRSRFAFHvtrveDDRTLMWATTWWQMKEYRL 145
                         **********9.9999**********65443334444558999*****98 PP
2NAM32.72.1e-103704939128
                 NAM   9 PtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk...kvka.eek.ew...yfFskrdkkyatgkrknratksgyWkatgkdk 90 
                         P+    +++yL +k+ + +l+     ++ vd++ + P  L       ++ e++  w   yfF  + ++       +r +  g W + g +k
  Brast09G117600.1.p 370 PSGLHAITCYLGPKAVHGRLPGYCYvVQGVDVFAAPPYALSFpfsY-SHlERRvVWgagYFFGAKTTT-----SMRR-VPGGCWIQNGIEK 453
                         666678999*****9999976644449*************743442.332333456778999887553.....3455.688*********9 PP

                 NAM  91 evlskkgelvglkktLvfy..kg.rapkgektdWvmheyrl 128
                         +    +g+   +++ +vf   +g  + k e+t Wvm+ey++
  Brast09G117600.1.p 454 RYQI-SGQIFACRRRFVFRaaRGhGRVKWERTPWVMKEYQI 493
                         9999.999**********955232344568*********86 PP
3NAM24.86.1e-0860373012128
                 NAM  12 eelvveyLkkkvegkk.....leleevikevdiykvePwdLpk...kvkaeekew.yfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                           ++++yL +k+   +     ++  + +++  i++  P  L     +  ++ + w yfF+++ + +         ++ g W + g +k+  
  Brast09G117600.1.p 603 PYVMTQYLMRKAILGRlttdvHSGPDYVQDRYIFDRSPDMLSFpagNRGEHGSVWgYFFHSTPTPS------MCPVAGGCWMQYGMEKRYE 687
                         56788999999777664444333334789999*********7433333334558899999986643......335678********99998 PP

                 NAM  94 skkgelvglkktLvfykgrapkge.........ktdWvmheyrl 128
                           +ge  g ++ +vf+ +++p+g          +t+W+m+ey+l
  Brast09G117600.1.p 688 M-SGEIFGSRRRFVFHAAHSPRGDydpaimvwkQTRWLMKEYSL 730
                         8.999***********999999988888888889********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-145174IPR003441NAC domain
PROSITE profilePS5100517.70610174IPR003441NAC domain
PfamPF023659.1E-612145IPR003441NAC domain
SuperFamilySSF1019419.42E-15356516IPR003441NAC domain
PROSITE profilePS5100517.706362518IPR003441NAC domain
PfamPF023656.2E-7370493IPR003441NAC domain
PROSITE profilePS5100513.043592760IPR003441NAC domain
SuperFamilySSF1019418.5E-10605760IPR003441NAC domain
PfamPF023652.3E-6605730IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 863 aa     Download sequence    Send to blast
MEPSTGGMIL APGNVFKVSG RQLITLYLSH KALSGELSNA ILPGGCSVEA GVDIFAASPH  60
ALPFVPSHRA PHDVVWGYFS AEQPAEHIQP APGGCWVRYG AEKRYMINGE ELGYRSRFAF  120
HVTRVEDDRT LMWATTWWQM KEYRLNKGAP LFRAALPKHP KANMDFVIRK VFNKPSVLLL  180
KRASTVQPLK VQRVEIPLPS PNVKDCVEPA RQDSIASQAL RRGGSRLPPR AARPPRPPKA  240
SKKPKVAPPP PAGPVATPPP PAGPTVAPPP PAGPTVAPPP PAGPVVAPPA PAGPTVAPAP  300
PARPIDAPPP PAPSSSGAQP DSPKANTDVV ICKVKTLAPP PAPNPDSNRP GVNNPAMART  360
SFPPNVLKLP SGLHAITCYL GPKAVHGRLP GYCYVVQGVD VFAAPPYALS FPFSYSHLER  420
RVVWGAGYFF GAKTTTSMRR VPGGCWIQNG IEKRYQISGQ IFACRRRFVF RAARGHGRVK  480
WERTPWVMKE YQINKAFVRR LLRPKSNMDL VVLKIFPNTE PRLPAIIRTP PVRPIVAPPP  540
PALPSWEAWF SGAQPMGNTE VCKFKTMAPL RARSPDPNHQ EAASVNNQAA AMPRIAYKIP  600
SGPYVMTQYL MRKAILGRLT TDVHSGPDYV QDRYIFDRSP DMLSFPAGNR GEHGSVWGYF  660
FHSTPTPSMC PVAGGCWMQY GMEKRYEMSG EIFGSRRRFV FHAAHSPRGD YDPAIMVWKQ  720
TRWLMKEYSL NKVTSNMVTA ARRGLPMSNL DLVLLKVFTK PMPMGMALPP GPPLPPPPIP  780
PYKAPPPMPP PAADCDFEFP KLAFPPHPRP EWEKAFESLR RSILGSKHPR ENEESSEPND  840
EERATKRARP AGSSSGFPLI LD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast09G117600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP128912231