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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast08G104100.7.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 409aa MW: 45836.4 Da PI: 6.5142 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36 | 1.5e-11 | 100 | 128 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k err+++NReAAr+sR+RKka++++Le+ Brast08G104100.7.p 100 KTERRLAQNREAARKSRLRKKAYVQQLET 128 88*************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 8.8E-8 | 95 | 142 | No hit | No description |
SMART | SM00338 | 9.5E-5 | 96 | 155 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.22 | 98 | 142 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.9E-9 | 100 | 128 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.71E-7 | 100 | 141 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 103 | 118 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.5E-27 | 181 | 255 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 409 aa Download sequence Send to blast |
MNHLQQPYSA NSQSVGSTDS SSAQNTMSQA ELVSPVSMRT DSGQQQEVLM VTIDDYNYNQ 60 GLGPAAAATV TAPSFQQHAG GQDKRKHGST RKDDKLLDPK TERRLAQNRE AARKSRLRKK 120 AYVQQLETGR IRLQQIEQEL QRGRSQGLLT GGCSAPGDMS PGAVMFDMEY ARWLDEDSKY 180 MIELQSALQA QILDGNLGTI VEECLRHYDE LFHLRGVLAR SDVFHLMTGM WATQSERCFL 240 WMAGFRPSEI LKMLTPQLDP LTEQQLLGMF NLQQSSEQAE EALAQGLHQL HQSLADAVGA 300 GPLNDGADVA NYTSLMALAL DRLDNLESFY READNLRRQT LHRMRQILTT RQTARCFLSI 360 GEYHRHLRAL SSIWAARPRE NFIMGENVSS TGTEFQVHQS QQNQFSGL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast08G104100.7.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014755267.1 | 0.0 | transcription factor TGAL5 isoform X12 | ||||
Refseq | XP_024315099.1 | 0.0 | transcription factor TGAL5 isoform X13 | ||||
Swissprot | Q6F2N0 | 0.0 | TGAL5_ORYSJ; Transcription factor TGAL5 | ||||
TrEMBL | A0A2K2DA63 | 0.0 | A0A2K2DA63_BRADI; Uncharacterized protein | ||||
STRING | BRADI2G23890.1 | 0.0 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 1e-134 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Brast08G104100.7.p |
Publications ? help Back to Top | |||
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