PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast08G104100.5.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 472aa MW: 52510.2 Da PI: 6.2792 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.7 | 1.8e-11 | 163 | 191 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k err+++NReAAr+sR+RKka++++Le+ Brast08G104100.5.p 163 KTERRLAQNREAARKSRLRKKAYVQQLET 191 88*************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-7 | 158 | 205 | No hit | No description |
SMART | SM00338 | 9.5E-5 | 159 | 218 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.22 | 161 | 205 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.77E-7 | 163 | 204 | No hit | No description |
Pfam | PF00170 | 8.3E-9 | 163 | 191 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 166 | 181 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.2E-27 | 244 | 318 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence Send to blast |
MPKAWILELQ PAAAAYFGEL GEALIHGTCA GVNPVMIEGD AHTKSAAYLA ARPPTLEIFP 60 SWPMNHLQQP YSANSQSVGS TDSSSAQNTM SQAELVSPVS MRTDSGQQQE VLMVTIDDYN 120 YNQGLGPAAA ATVTAPSFQQ HAGGQDKRKH GSTRKDDKLL DPKTERRLAQ NREAARKSRL 180 RKKAYVQQLE TGRIRLQQIE QELQRGRSQG LLTGGCSAPG DMSPGAVMFD MEYARWLDED 240 SKYMIELQSA LQAQILDGNL GTIVEECLRH YDELFHLRGV LARSDVFHLM TGMWATQSER 300 CFLWMAGFRP SEILKMLTPQ LDPLTEQQLL GMFNLQQSSE QAEEALAQGL HQLHQSLADA 360 VGAGPLNDGA DVANYTSLMA LALDRLDNLE SFYREADNLR RQTLHRMRQI LTTRQTARCF 420 LSIGEYHRHL RALSSIWAAR PRENFIMGEN VSSTGTEFQV HQSQQNQFSG L* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast08G104100.5.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010231321.1 | 0.0 | transcription factor TGAL5 isoform X10 | ||||
Swissprot | Q6F2N0 | 0.0 | TGAL5_ORYSJ; Transcription factor TGAL5 | ||||
TrEMBL | A0A2K2DA63 | 0.0 | A0A2K2DA63_BRADI; Uncharacterized protein | ||||
STRING | BRADI2G23890.1 | 0.0 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 1e-135 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Brast08G104100.5.p |
Publications ? help Back to Top | |||
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