PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast08G075300.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 233aa    MW: 25218.1 Da    PI: 5.9812
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast08G075300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.61.7e-1077123551
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                          ++rr   NReA r++R++Kka+ + Lee+v +L a N++L  +l+ 
  Brast08G075300.1.p  77 AKARRPLGNREAVRKYREKKKARAAFLEEEVRKLRAANQQLLRRLQG 123
                         57899999*********************************999874 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-970140IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.8E-1570141No hitNo description
PfamPF077167.0E-1474130IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.70375122IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-778123No hitNo description
CDDcd146862.06E-1278131No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MDDGVDLPSQ FLFSHPDPEI PGTFDDLLSN ASTTSCTHTH NCNAPGPSSA AMHTHTCQHT  60
HTQVFATGSE DDDDPAAKAR RPLGNREAVR KYREKKKARA AFLEEEVRKL RAANQQLLRR  120
LQGHATLEAE VVRLRSLLVD VRAKIDTEVA VPVSPFQNQK MPLPCSVGSV ACSDRPALCF  180
NGNSGAGAWE ESSRPAAADC RFEEVGNGGA ARETDVLEQV HSMDVADLCF HS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast08G075300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003566090.11e-145basic leucine zipper 23
TrEMBLA0A2K2D9N71e-133A0A2K2D9N7_BRADI; Uncharacterized protein
STRINGBRADI2G21197.11e-144(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38313675
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.18e-10bZIP family protein