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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Brast06G233800.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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| Family |
HB-other |
| Protein Properties |
Length: 291aa MW: 32871.3 Da PI: 4.6898 |
| Description |
HB-other family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Brast06G233800.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 25.5 | 2.2e-08 | 222 | 269 | 6 | 53 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53
+++k qle+Le+++ +++ p+ +++ + + ++L+ + + WF rR
Brast06G233800.1.p 222 RLKKVQLETLERVYLRSKRPTNTMISSIVQVTSLPRKTIVEWFEDRRE 269
67899*****************************************95 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MPKKIGSEHT GQTKECYIME TQKGEEEFKD NRSRPLAPRF ISLDARQFVT EAKIKLGRDL 60
FVGPLPLQLE DDLKNKDGLS VEDDDDDDDE ISEEDMARFE QALAEAIGDI DVGNGEESDA 120
ELKNWQLRRL ACALKIGRRK TSIKNLAGEL GLDRGLVIEL LRNPPPKLLL MSDSLPDEAP 180
SKPQAKEIEP SPVVDEVDVT ETKPQMDIPI HVMSAEWSTQ KRLKKVQLET LERVYLRSKR 240
PTNTMISSIV QVTSLPRKTI VEWFEDRREQ DGVPDHRAAY KRPLSETIAS *
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | May modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity). Homeodomain transcription factor that mediates jasmonic acid (JA)-mediated COI1-dependent and abscisic acid (ABA)-mediated PMR4-dependent resistance to infection by necrotrophic fungal pathogens (e.g. B.cinerea and P.cucumerina) and bacterial pathogens (e.g. P.syringae DC3000); this resistance involves at least callose deposition (PubMed:15923348, PubMed:20836879, PubMed:21564353). Required for the P.fluorescens WCS417r-triggered JA-dependent induced systemic resistance (ISR) against both P.syringae DC3000 and H.arabidopsidis (PubMed:20836879). Negative regulator of the ABA-dependent drought resistance (PubMed:19175769). {ECO:0000250|UniProtKB:Q70Z19, ECO:0000269|PubMed:15923348, ECO:0000269|PubMed:19175769, ECO:0000269|PubMed:20836879, ECO:0000269|PubMed:21564353}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Constitutively expressed in healthy plants but repressed in response to infection by necrotrophic fungi (PubMed:15923348). Repressed by drought and abscisic acid (ABA) (PubMed:19175769). {ECO:0000269|PubMed:15923348, ECO:0000269|PubMed:19175769}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FP100138 | 1e-170 | FP100138.1 Phyllostachys edulis cDNA clone: bphyst013o11, full insert sequence. |
| Publications
? help Back to Top |
- García-Andrade J,Ramírez V,López A,Vera P
Mediated plastid RNA editing in plant immunity.
PLoS Pathog., 2013. 9(10): p. e1003713
[PMID:24204264] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Gamir J,Pastor V,Kaever A,Cerezo M,Flors V
Targeting novel chemical and constitutive primed metabolites against Plectosphaerella cucumerina.
Plant J., 2014. 78(2): p. 227-40
[PMID:24506441]
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