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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast06G007800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 283aa MW: 30272.2 Da PI: 9.3442 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 55 | 1.8e-17 | 171 | 221 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk el++l+ ++ Brast06G007800.1.p 171 RRQKRMIKNRESAARSRARKQAYMNELENKVSRLEEENRRLK-ELKRLEPMA 221 79****************************************.9**999775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.1E-13 | 167 | 230 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.369 | 169 | 213 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.09E-19 | 171 | 224 | No hit | No description |
SuperFamily | SSF57959 | 4.81E-11 | 171 | 213 | No hit | No description |
Pfam | PF00170 | 1.6E-13 | 171 | 217 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.9E-14 | 171 | 217 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 174 | 189 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence Send to blast |
MGVQTMAAAS LGGGGGRQGA AVYGLTLNEV ESRLGSPLRS MNLDELLRTV LPAAAAGGGP 60 PGPGKKTVDE VWRDIESAAR GRQPAAMEVG EMTLEDFLSR AGVPVDGGGA HWLLHQYHPP 120 PRPLPAYHGH GGGGGGGFLS PSQAGGGRKR GAGGEDEGGG GGGGGEKTVE RRQKRMIKNR 180 ESAARSRARK QAYMNELENK VSRLEEENRR LKELKRLEPM AGQCVSRPEP MLQRLEPMVV 240 QYVTRPEPMV VQYVPEPEPE PEPEPEPKQH QLQLRRTISA SF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast06G007800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014757254.1 | 1e-118 | ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
Swissprot | Q9C5Q2 | 1e-43 | AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3 | ||||
TrEMBL | A0A0Q3GUA0 | 1e-117 | A0A0Q3GUA0_BRADI; Uncharacterized protein | ||||
STRING | BRADI1G17335.1 | 1e-115 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4441 | 33 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41070.3 | 1e-26 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Brast06G007800.1.p |
Publications ? help Back to Top | |||
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