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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast05G155300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 187aa MW: 20922.3 Da PI: 7.7437 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.9 | 7.7e-12 | 81 | 132 | 1 | 52 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 e+e +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L +el++ Brast05G155300.1.p 81 EEEERRRRRMVSNRESARRSRVRKQRQLSELWAQVVHLRGANRRLLDELNQA 132 67889*****************************************999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.5E-9 | 80 | 131 | No hit | No description |
Pfam | PF00170 | 1.6E-9 | 81 | 133 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.2E-11 | 81 | 145 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.059 | 83 | 134 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.38E-10 | 85 | 133 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 88 | 103 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 5.80E-13 | 90 | 134 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MLHHYHGEVA SLHCLTPPNP PLFHTHFQSS MIAMAPPPFQ FSAAAYEDEP AVQVQEPLAA 60 ISNSSGGAGD TDIHGRAAAA EEEERRRRRM VSNRESARRS RVRKQRQLSE LWAQVVHLRG 120 ANRRLLDELN QAMRGRDDVL RENGRLSDEK AELETRLQQC LMRAQENNNI NAPSSSSYKN 180 TTTAAE* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 103 | RRSRVRK |
2 | 97 | 104 | RRSRVRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast05G155300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003576641.1 | 1e-89 | bZIP transcription factor 11 | ||||
TrEMBL | I1IQZ9 | 3e-88 | I1IQZ9_BRADI; Uncharacterized protein | ||||
STRING | BRADI4G32920.1 | 4e-89 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 1e-12 | basic leucine-zipper 42 |
Link Out ? help Back to Top | |
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Phytozome | Brast05G155300.1.p |