PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast05G015800.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 357aa    MW: 36458.6 Da    PI: 8.2249
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast05G015800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.61.5e-09128183156
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                         eke kr rr   NRe+Ar   +R++a  +eL++kv+ L a+N+++kk +++ kk++
  Brast05G015800.1.p 128 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLAAQNESMKKVAKTTKKKA 183
                         89************************************************999976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.3E-4125181No hitNo description
SMARTSM003381.9E-6128192IPR004827Basic-leucine zipper domain
PfamPF001705.6E-8128182IPR004827Basic-leucine zipper domain
CDDcd147021.86E-11133172No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MTSTDSDGGL MQMQCRRRGG SADVELHAAM ALAGMAGAGK AENPHQAMAT AGKEREEEEE  60
EEEDLASTRL SLELGNVGIN SQYLSSSPCS SSSSAGAAHN SAQPAAPALP GYGGGGGLRA  120
RQPLTEAEKE AKRLRRVLAN RESARQTILR RQAIRDELAR KVADLAAQNE SMKKVAKTTK  180
KKAPPATAGA MEAADESSPQ AQQPSFLYTA PPPAMPVPFV WGGSSWPPAG GAYDHGAAAG  240
AGAGAGGGHL HAPPPPLCFP PGCAWYYPVM AAAGGGSPTS QEPPPSAAGA GEDDPCSLTL  300
AIDAAAAAKR TVYQSSSKES KAAAAADARR RRKELTKLKQ LHAAGGRHGA GAGDHW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1328333RRRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast05G015800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ2457505e-45DQ245750.1 Zea mays clone 20079 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615785.12e-58uncharacterized protein LOC4349815
TrEMBLA0A3B6HVZ68e-93A0A3B6HVZ6_WHEAT; Uncharacterized protein
STRINGTraes_4DS_FAFED0328.21e-90(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.13e-08bZIP family protein