PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast04G342400.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 205aa MW: 22050.5 Da PI: 8.8679 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.8 | 2.3e-13 | 132 | 181 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r+rr++kNRe+A rsR+RK+a++ eLe + ++L N++L k+ + l+ Brast04G342400.1.p 132 RRQRRMIKNRESAARSRARKQAYTNELELELAQLRRDNQMLLKRHQDLNA 181 69****************************************88877764 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.3E-9 | 128 | 192 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.519 | 130 | 183 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-11 | 132 | 181 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 5.25E-21 | 132 | 184 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.7E-13 | 132 | 184 | No hit | No description |
SuperFamily | SSF57959 | 1.25E-10 | 132 | 183 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 135 | 150 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MEEEVIWRDM SSLSSTPVGA LQQQHYYMIS SPAPARGRPP PTALTLSSTL EFTYLGCAAA 60 AAAAASNSSS GDDSQLMPHS TDHPAADLDD ILISFAAASN NHTAGAGAGS NTSNTNNNNK 120 RSTIAAGGGC ERRQRRMIKN RESAARSRAR KQAYTNELEL ELAQLRRDNQ MLLKRHQDLN 180 ARLAMEVQVP DRSTLQRCRS APAP* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast04G342400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003573205.1 | 2e-99 | protein FD | ||||
TrEMBL | I1HVY4 | 5e-98 | I1HVY4_BRADI; Uncharacterized protein | ||||
STRING | BRADI3G00300.1 | 9e-99 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14602 | 10 | 20 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 4e-22 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Brast04G342400.1.p |