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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Brast03G259600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family |
Trihelix |
Protein Properties |
Length: 328aa MW: 36412.9 Da PI: 5.5661 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Brast03G259600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 60.1 | 5.6e-19 | 28 | 114 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm........rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84
W++ e+++L++++++++++lrrg+lk+++We+v++ g +++ +qC++k+e+l+kry++++++ s +p+f++
Brast03G259600.1.p 28 WSHTETMHLLDVYEDRWNKLRRGQLKAQQWEDVAAETtarcgginGGPGQRKTGTQCRHKLEKLRKRYRAEAARPVA------SLWPFFRR 112
*************************************999999876677788*******************999886......58****** PP
trihelix 85 le 86
++
Brast03G259600.1.p 113 MD 114
98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MDSDDPRRAP APAGGGATTK KSGPGQPWSH TETMHLLDVY EDRWNKLRRG QLKAQQWEDV 60 AAETTARCGG INGGPGQRKT GTQCRHKLEK LRKRYRAEAA RPVASLWPFF RRMDQLERGP 120 RAALSPPAAA ASDDDDERDE EEDEEGEEEE EDEEGGQQVG EPELVPRNSN HTRSINGILR 180 DGGGGFRGFT SRPPQPQQPQ QQQQPPPPGL TLSNAPPRKR VAYEAFQAQA AADRVKAEEA 240 QADRSGAVAD GPFSDVLRDF SEGLMRLERR RMEVQWEIER GWKEVEARHG RMLQDAQRRI 300 QNTIVAASAS GKKARRDHGS SADDEDL*
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