PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast03G008200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | NAC | ||||||||
Protein Properties | Length: 187aa MW: 19889.4 Da PI: 9.4765 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 32.8 | 2.1e-10 | 4 | 131 | 8 | 127 |
NAM 8 hPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeek....ewyfFskrdkkyatgkrknra....tksgyWka 85 + +de l v+ L+++ g +l +++ +++++++P +L aee+ ++fFs+ + + +g ++ + g Wka Brast03G008200.1.p 4 NAEDERLAVQALARRQLGLLpPPLPFAVHYANVFSSHPAQLYDdfreG--AEEQggygGVFFFSQMACRRGRGPSRSSSssssNGPGQWKA 92 5577888877787776665524454469999**********7423331..22223344669999887766654322222222245899**9 PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 + +++ ++g vg + tL y gra + + W m+ y+ Brast03G008200.1.p 93 ATGNATIYGSQGGGVGGRMTLLHYGGRAGR---SGWAMDVYS 131 9999*****9**************888876...9****9997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 20.227 | 1 | 157 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.14E-16 | 6 | 157 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MRMNAEDERL AVQALARRQL GLLPPPLPFA VHYANVFSSH PAQLYDDFRE GAEEQGGYGG 60 VFFFSQMACR RGRGPSRSSS SSSSNGPGQW KAATGNATIY GSQGGGVGGR MTLLHYGGRA 120 GRSGWAMDVY SARGNGIINN QQLLRDPGLR LCRVYWTGLG PPPMTAVREA PPELAGEFGS 180 MCSMGT* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast03G008200.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014756233.1 | 2e-76 | uncharacterized protein LOC106866490 | ||||
TrEMBL | A0A0Q3HPV5 | 4e-75 | A0A0Q3HPV5_BRADI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP50157 | 2 | 2 |
Link Out ? help Back to Top | |
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Phytozome | Brast03G008200.1.p |