PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast02G382000.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | NAC | ||||||||
Protein Properties | Length: 746aa MW: 81513.6 Da PI: 6.5123 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 35.6 | 2.7e-11 | 27 | 154 | 18 | 128 |
NAM 18 yLkkkvegkk...leleevikevdiykvePwdLpk.........kvkaeekewyfFskrdkkya.tgkrknra.....tksgyWkatgkdk 90 L++k+ g k + +i+e++ y+++P dL + + +++ +wyf ++++ +++ g+r++r +++g W++ k+k Brast02G382000.3.p 27 LLRHKAVGGKpfpRSHRPFIHEANPYSSHPADLVRgrahapgtdRGDGRGGDWYFCFPSKYQETvAGRRAKRRsrtvgAQDGCWHSESKKK 117 5666655444443222235**************744566665432223444998755555444436777777535555669********** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + + ++ + ++ + k ++t W+m e +l Brast02G382000.3.p 118 PIQD-RAYVTPFSYKMKVLENAKFKHQRTGWCMAEIQL 154 ***9.677777788888888999999*********987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 12.917 | 10 | 168 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.84E-16 | 26 | 168 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-4 | 28 | 153 | IPR003441 | NAC domain |
Gene3D | G3DSA:3.40.1160.10 | 4.9E-13 | 230 | 278 | IPR001048 | Aspartate/glutamate/uridylate kinase |
Pfam | PF00696 | 2.8E-9 | 230 | 370 | IPR001048 | Aspartate/glutamate/uridylate kinase |
SuperFamily | SSF53633 | 1.83E-40 | 230 | 473 | IPR001048 | Aspartate/glutamate/uridylate kinase |
PROSITE pattern | PS00324 | 0 | 231 | 239 | IPR018042 | Aspartate kinase, conserved site |
Gene3D | G3DSA:3.40.1160.10 | 4.9E-13 | 318 | 369 | IPR001048 | Aspartate/glutamate/uridylate kinase |
Gene3D | G3DSA:3.40.1160.10 | 6.9E-21 | 381 | 475 | IPR001048 | Aspartate/glutamate/uridylate kinase |
Pfam | PF00696 | 9.3E-12 | 381 | 443 | IPR001048 | Aspartate/glutamate/uridylate kinase |
SuperFamily | SSF55021 | 2.37E-5 | 480 | 546 | No hit | No description |
SuperFamily | SSF55021 | 4.12E-7 | 559 | 635 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0008652 | Biological Process | cellular amino acid biosynthetic process | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004072 | Molecular Function | aspartate kinase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 746 aa Download sequence Send to blast |
MSAPNSPTSE QLQTLTPDLR PSVFARLLRH KAVGGKPFPR SHRPFIHEAN PYSSHPADLV 60 RGRAHAPGTD RGDGRGGDWY FCFPSKYQET VAGRRAKRRS RTVGAQDGCW HSESKKKPIQ 120 DRAYVTPFSY KMKVLENAKF KHQRTGWCMA EIQLEENVEL VLCRVYRSPR PSSAARGERG 180 APAPPLIDQI SPCAGRISPA SGGSGAMSEL GKGWMIRCQS GAAAAAAADT VMKFGGSSIP 240 SAEGMKEAAS IVLSFPEGTP APVVVLSAMG KTTTNLLMAA DNALRWRTHK AWEIRELDAV 300 QELHLSTVDA LGLDRSIISG SLDELKQLLK HVALDHTLTP KTRDIILSHG ELMSTTIFSA 360 YLNKLGEGAQ QEWEWSAISN VGSGGSDLAA ISIARELRAR KIVVWKDVNG LFTCDPNVFE 420 SALPLPYLNF NEATALGFFA AQSMELALEI GIPVIVKSLY NPQAPGTMLT KTREMNESEL 480 TRIMLTSNLT MLDIKSTGAV DRSRFVTKAF SIFTKFGISV DHAVISQCEV LIILVPSKLL 540 SHESIQMQKL DVVIEELQQI AAVHALSHRS FISLIGTAEM STTILEKAFG ALTRINVKTQ 600 MSSHGSSKVM NIFLVVNDNE ATNCVEALHS EFVEKYLSEV HGADSEHNSS LVPVSSSVAA 660 SSGDKRKPDD EHRTQCLDTE TDDYHMDMRV LSGNFDNTLT FIAEEDFTND VEAVVVEHWS 720 LFAGEEEGVY VAPHTYQFLE GVTAP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2cdq_A | 1e-118 | 231 | 634 | 30 | 484 | ASPARTOKINASE |
2cdq_B | 1e-118 | 231 | 634 | 30 | 484 | ASPARTOKINASE |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the first step of essential amino acids lysine, threonine, methionine and isoleucine synthesis via the aspartate-family pathway. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast02G382000.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Swissprot | Q9LYU8 | 1e-117 | AK1_ARATH; Aspartokinase 1, chloroplastic | ||||
TrEMBL | A0A3B6SLB9 | 1e-157 | A0A3B6SLB9_WHEAT; Uncharacterized protein |
Link Out ? help Back to Top | |
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Phytozome | Brast02G382000.3.p |