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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Brast02G132400.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
|
| Family |
Dof |
| Protein Properties |
Length: 398aa MW: 41121.6 Da PI: 9.4712 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Brast02G132400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 122.7 | 1.2e-38 | 87 | 147 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+e alkcprCdstntkfCyynnyslsqPr+fCkaCrryWt+GGalr vPvGgg+r+nk+s+
Brast02G132400.1.p 87 PEPALKCPRCDSTNTKFCYYNNYSLSQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKRSK 147
67899*****************************************************987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MVFPSVPAYL DPPNWNNQQG QQPRASGAGS GGSSAGDAAL QHVPVGPAAA ALAGNEAAGP 60
QQQQQQQARA NPHSMTERAR MARAPQPEPA LKCPRCDSTN TKFCYYNNYS LSQPRHFCKA 120
CRRYWTRGGA LRSVPVGGGC RRNKRSKSKP SSSSSASSRQ QLPGGAAASS SMPSTAPGSG 180
VAMIPPVGLG SSMAHHLPFL GTMQQHAPGA GPGLGLAFSV GLPPLGIGIG MHQQQQQHMD 240
GVDQSSFPLA SGGGAATFGA SLEQQWRVHQ QQQFPFLELP PPPPPGPPMY QLGALQGNRA 300
GAAPSGMFTL GQTATAARHE RTSVKQLADD DDSKGGQEMS LQRQYMEALR QQAGDQGVWG 360
GSGNGADDGN GSGSSWTMNL PGFHSSSTGD HGGGGLL*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC083942 | 1e-83 | AC083942.8 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence. |
| GenBank | AC137698 | 1e-83 | AC137698.1 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence. |
| GenBank | AP014959 | 1e-83 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012611 | 1e-83 | CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence. |
