PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Brast01G250400.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 127aa MW: 13852.6 Da PI: 9.2132 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.6 | 1.2e-12 | 27 | 85 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +rk++NR++A+rsR+RK+ +++eLe v++L a N a++ ++e + +a++++e+ Brast01G250400.1.p 27 RKRKRKESNRLSAQRSRARKQRQVDELEAQVAALRARNCAMAAAADEAERRCAAVQAEN 85 6789*************************************************999887 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-10 | 23 | 87 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.2E-8 | 24 | 106 | No hit | No description |
PROSITE profile | PS50217 | 10.542 | 25 | 88 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.4E-10 | 26 | 84 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.0E-9 | 27 | 79 | No hit | No description |
CDD | cd14702 | 4.40E-9 | 28 | 79 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 30 | 45 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 127 aa Download sequence Send to blast |
MASPGMVSSI TTSSAGSGAA VALTEERKRK RKESNRLSAQ RSRARKQRQV DELEAQVAAL 60 RARNCAMAAA ADEAERRCAA VQAENALLSA RALELSQRLE SLTDLIQCMD AIMYSNTNNT 120 NNYYYY* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 26 | 31 | RKRKRK |
2 | 26 | 32 | RKRKRKE |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Brast01G250400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_024315686.1 | 8e-46 | bZIP transcription factor 11-like | ||||
TrEMBL | A0A1E5VQF2 | 3e-46 | A0A1E5VQF2_9POAL; Uncharacterized protein | ||||
STRING | BRADI2G40580.1 | 3e-45 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13757 | 24 | 28 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Brast01G250400.1.p |