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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Bradi5g20847.1.p |
Common Name | BRADI_5g20847, LOC100845756 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family |
Trihelix |
Protein Properties |
Length: 276aa MW: 32094.9 Da PI: 9.2268 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bradi5g20847.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 77.2 | 2.6e-24 | 18 | 105 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W qe+++Li+ar e+e++ +++ ++k+lWe+v++++r+rg++r++ qCk+kw+nl +ryk ++++ ++ ++cp+f++l+
Bradi5g20847.1.p 18 WGTQETRELIAARGELEREAAAASagaaasrSAKTLWEAVAARLRARGYRRTADQCKCKWKNLVNRYKGKETSNPEN----GRQCPFFEELH 105
******************9997644445555*******************************************984....678******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MEAGVGGGGF RDERVPPWGT QETRELIAAR GELEREAAAA SAGAAASRSA KTLWEAVAAR 60 LRARGYRRTA DQCKCKWKNL VNRYKGKETS NPENGRQCPF FEELHAVFTE RARNMQRELL 120 QSESGASVKM KLKRTSDDRS SGESDDEEDE VEVSEDEKPM RSRKRKAGDK GQQLRRTVEN 180 SNTGRSSIRD LLHDFLVQQQ HMDIQWREVM ERRAQERLVF EQEWRRSMQK LEQERLMLEH 240 SWMEREEQRR MREEARAQKR DSLLTTLLNK LLQDL*
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