PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi4g43850.5.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 264aa MW: 28730 Da PI: 5.3917 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.2 | 6.1e-07 | 242 | 263 | 4 | 25 |
XCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKk 25 ++r++r++kNRe+A rsR+RK+ Bradi4g43850.5.p 242 DRRQKRMIKNRESAARSRARKQ 263 68*******************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 8.7E-5 | 241 | 263 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 246 | 261 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence Send to blast |
MSSQGGSTAV MGKGHHRAHI QTLVREGSLY NLTLSEVESH LGAPLLSMNL DDLVRSVLPD 60 DTSLPIRNGV GNSGSQNTPS SGLERQGSSI TVPPALSKKT VDEVWRDIQQ DQESSDDEER 120 SSGCEAQLSF GEMTLEEFLH RVGIVSEQHQ KDADELSGRV GTGEDSNLMT KVQDFPQGTS 180 PIDAFIIRQS IAQPLSVAIP STMDAIYPDG QMSISPSVAL SDLQTPTRKR ISSEDVVYKV 240 VDRRQKRMIK NRESAARSRA RKQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi4g43850.5.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003578996.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Refseq | XP_010238783.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | I1IUU2 | 0.0 | I1IUU2_BRADI; Uncharacterized protein | ||||
TrEMBL | I1IUU3 | 0.0 | I1IUU3_BRADI; Uncharacterized protein | ||||
STRING | BRADI4G43850.3 | 0.0 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 1e-41 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Bradi4g43850.5.p |