![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Bradi4g26520.2.p |
Common Name | BRADI_4g26520, LOC100835567 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family |
GRAS |
Protein Properties |
Length: 441aa MW: 50161.7 Da PI: 7.2441 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bradi4g26520.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Bdi&pid=Bradi4g26520.2.p) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 283.2 | 7.4e-87 | 21 | 437 | 4 | 374 |
GRAS 4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfsh 95
+L ecA +v++g++ +++ L +++elas + p+qRl ++ L +rl+r +++ ++al ps+ e a++ f +sP+l ++
Bradi4g26520.2.p 21 VLCECAVHVTEGSFDKTDCSLRKIRELASIVDGPLQRLSLIIADSLFRRLLRPMQGFASALiDPSRYLE--KWCLRVARNSFASISPYLATGF 111
699*************************************************99999988854544442..3444457778************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdis..qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
+t N+aIle v+ ++ v iiD++ s + QW+ +l+ + Rp+gpp+lR+T+v++ ++e l ++ L+k A +l +f+f+ v+ rl
Bradi4g26520.2.p 112 VTINRAILEQVQDKQVVRIIDLSGSttHQWQWLKILHDFHGRPGGPPELRLTVVHE----DSEFLDYMQTLLSKQAGTLMPSFHFDK-VVGRL 199
**********************8651155678999*********************....99*************************.7999* PP
GRAS 187 edleleeL....rvkpgEalaVnlvlqlhrll............................................desvsleserdevLklv 231
e+l++++L +++ gEa++++++lq+hrll + + ++++ ++L++v
Bradi4g26520.2.p 200 EALDFSNLreilKINFGEAVVISCALQMHRLLavdddddasrdgiaqlqqmankahlkqmmmassprstlsypqtpSPQRQIPKLLVSFLSAV 292
***9999844335555*********************************************************988666677778889***** PP
GRAS 232 kslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaG 323
+ l+P++vv++eqeadhn++ F erf+e l+yy+alfdsl +a ++re++er+ vEr+ll++ei+n++ cega+r erhe+l++W++ ++++
Bradi4g26520.2.p 293 RALKPNIVVMMEQEADHNAPLFRERFAEMLRYYAALFDSLnAAAAGREDDERARVERVLLREEIKNMLVCEGAQRHERHEKLSQWEMHMNRCE 385
****************************************989999999******************************************** PP
GRAS 324 Fkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
F++vpls +a + k + + ++ +ee+++ l+l W + L+svSaWr
Bradi4g26520.2.p 386 FQSVPLSFDAIREGKEKMMSSGlKECRGIEEDKHRLLLSWGETHLYSVSAWR 437
**************99999999888899***********************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 441 aa
Download sequence Send
to blast |
MHGAGSQEQR MQDHLAQLGP VLCECAVHVT EGSFDKTDCS LRKIRELASI VDGPLQRLSL 60 IIADSLFRRL LRPMQGFASA LIDPSRYLEK WCLRVARNSF ASISPYLATG FVTINRAILE 120 QVQDKQVVRI IDLSGSTTHQ WQWLKILHDF HGRPGGPPEL RLTVVHEDSE FLDYMQTLLS 180 KQAGTLMPSF HFDKVVGRLE ALDFSNLREI LKINFGEAVV ISCALQMHRL LAVDDDDDAS 240 RDGIAQLQQM ANKAHLKQMM MASSPRSTLS YPQTPSPQRQ IPKLLVSFLS AVRALKPNIV 300 VMMEQEADHN APLFRERFAE MLRYYAALFD SLNAAAAGRE DDERARVERV LLREEIKNML 360 VCEGAQRHER HEKLSQWEMH MNRCEFQSVP LSFDAIREGK EKMMSSGLKE CRGIEEDKHR 420 LLLSWGETHL YSVSAWRPRG *
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