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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi4g13570.1.p | ||||||||
Common Name | BRADI_4g13570 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | NAC | ||||||||
Protein Properties | Length: 76aa MW: 8005.36 Da PI: 6.5139 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 36 | 2e-11 | 13 | 62 | 1 | 51 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkv 51 lp Gf F P deel v+yL+kk+ + l+ ++i+ +d+ +++P dLp + Bradi4g13570.1.p 13 LPIGFPFLPADEELAVHYLRKKALSFLLSS-DIIHVADLARIDPADLPGES 62 699**********************99999.99**************9432 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.19E-15 | 9 | 71 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 17.202 | 13 | 75 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 76 aa Download sequence Send to blast |
MATPVSGGGV LGLPIGFPFL PADEELAVHY LRKKALSFLL SSDIIHVADL ARIDPADLPG 60 ESRKFLPVRG AAVYF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi4g13570.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003561060.1 | 6e-19 | NAC domain-containing protein 83 | ||||
TrEMBL | I1IKC0 | 4e-45 | I1IKC0_BRADI; Uncharacterized protein | ||||
STRING | BRADI4G13570.1 | 7e-46 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP22784 | 4 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 8e-14 | NAC domain containing protein 83 |
Link Out ? help Back to Top | |
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Phytozome | Bradi4g13570.1.p |