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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Bradi3g38682.2.p |
Common Name | BRADI_3g38682 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family |
Trihelix |
Protein Properties |
Length: 365aa MW: 40602 Da PI: 6.6486 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bradi3g38682.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 61.3 | 2.3e-19 | 37 | 123 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm........rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W++ e+++L++++++++++lrrg+lk+++We+v++ + g +++ +qC++k+e+l+kry++++++ s +p+f++++
Bradi3g38682.2.p 37 WSHAETMHLLDVYEDRWNKLRRGQLKAQQWEDVAAETtarcvasgAGAGQRKTGTQCRHKLEKLRKRYRAEAARPVA------SLWPFFRRMD 123
************************************99*****998999999*******************999886......58******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 365 aa
Download sequence Send
to blast |
MDSDDPRHDL RGRAPAPALP GASGGATTKK SGPGQPWSHA ETMHLLDVYE DRWNKLRRGQ 60 LKAQQWEDVA AETTARCVAS GAGAGQRKTG TQCRHKLEKL RKRYRAEAAR PVASLWPFFR 120 RMDQLERGPR AALSPPAAAS DDEGEEEEEE EEEGEEDDED EEGQRQVEEP ELVPRNSKSI 180 NGILRDGGGG FRGFTSRPPQ PQQPPPPSPC LTLSNAPPRK RVAYEAFQAQ AAADRVKAEE 240 AQADRSGAVA HGPFSDVLRD FGEGLMRLER RRMDVQWEIE RGWKEVEARH SRMLQDAQRR 300 IQDTIAAVAA SASGKKARRD HGSSGDDDFA SQMKIRQRLV AKFFQTAWTS GKIGRSTKAE 360 EYVDL
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