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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Bradi3g37810.1.p |
| Common Name | BRADI_3g37810, LOC100826574 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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| Family |
HD-ZIP |
| Protein Properties |
Length: 347aa MW: 36386.5 Da PI: 6.7845 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bradi3g37810.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.6 | 4.4e-18 | 173 | 227 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++k+q Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
Bradi3g37810.1.p 173 RKKLRLSKDQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTK 227
778899***********************************************98 PP
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| 2 | HD-ZIP_I/II | 128.3 | 3.2e-41 | 173 | 263 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+kk+rlsk+q+++LEesF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk
Bradi3g37810.1.p 173 RKKLRLSKDQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELSELR-ALK 263
69*************************************************************************************9.665 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MELGLSLGEA PAVADAGRPA PELVLGLGVG AGRGGDQEGD KRRREAAAGA GWWAAATAAS 60
PEPSVRLSLV SSHGLRWPSD TGRSEATARG FDVNRMPSVA VGTELEEEED DPAAAAALSS 120
SPNDDSGGSF PFDLSAHGGH LGTSEAAAEA ALAGGGERSS SRASDDDEGA SARKKLRLSK 180
DQSAFLEESF KEHSTLNPKQ KVALAKQLNL RPRQVEVWFQ NRRARTKLKQ TEVDCEYLKR 240
CCETLTEENR RLHKELSELR ALKTAQPFYM HLPATTLSMC PSCERVASNP AAAASSSASK 300
VISKAAAAPE QRTSSAFAAL FASPRGGFPL AAQTRPPPPP AASNCL*
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| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 221 | 229 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
