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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Bradi2g56145.1.p |
| Common Name | BRADI_2g56145, LOC100840520 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
|
| Family |
ERF |
| Protein Properties |
Length: 378aa MW: 39372.6 Da PI: 6.5086 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bradi2g56145.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 65.1 | 1.4e-20 | 148 | 197 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g
Bradi2g56145.1.p 148 RYRGVRQRP-WGKWAAEIRDP-----HkaQRVWLGTFDTAEAAARAYDEAALRFRG 197
7********.**********7.....337************************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MCFELADPRG PHGGSPGKSG GDNSGASPAA MAMASPEELM SGYYQAQEMS TMVSALSRVV 60
ASDDPWAAEA SSWAAPASGA GGAGNAMHGA GRGGYYGQEQ GSFFRGAPSQ EFAGSDQSSD 120
TQSAATMEAE QHHHHHQQQA NPEAPRRRYR GVRQRPWGKW AAEIRDPHKA QRVWLGTFDT 180
AEAAARAYDE AALRFRGSRA KLNFPEDARL HPAPTTAAAA VNPPAQAPVA AAAASISAAA 240
TMYPGAAQTA DAYLRYQMLL QRSGVTINNQ GALVPLYGGG MAGSYGGGGA TSAGLGSYYS 300
FPSSSVSVAT VPSSSSASSA SGGQYYSSSH DSHHHHYQQH QQQQQGEAAA EWNWESALDY 360
PGTTASWSDS PPPPHNQ*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK354911 | 1e-85 | AK354911.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv1013E04. |
| GenBank | AK363078 | 1e-85 | AK363078.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2012J04. |
| GenBank | AK365834 | 1e-85 | AK365834.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2038B24. |
| GenBank | AK365878 | 1e-85 | AK365878.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2038I11. |
