PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi2g53060.5.p | ||||||||
Common Name | BRADI_2g53060, LOC100827454 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 339aa MW: 37077.7 Da PI: 8.9656 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.8 | 7.3e-16 | 268 | 311 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+ Bradi2g53060.5.p 268 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKKQ 311 69***************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.4E-14 | 264 | 336 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.0E-15 | 266 | 311 | No hit | No description |
PROSITE profile | PS50217 | 11.702 | 266 | 311 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-11 | 268 | 313 | No hit | No description |
CDD | cd14707 | 2.20E-25 | 268 | 317 | No hit | No description |
Pfam | PF00170 | 5.4E-13 | 268 | 311 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 271 | 286 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence Send to blast |
MGSRKMASQP GRGGGDAGTS QRGQMQNLAR QGSLYSLTLD EVQNHLGEPL QSMNLDELLR 60 TVFPDEADPD GATTSKYEPS AGLLRQGSIT MPSELSKKTV DEVWKGIQDA PKKNVQEGGR 120 RRRERQTTLG EMTLEDFLVK AGVVAEGYLK DLNDAGNGGF VGRGATAAGA TELTSGAQWL 180 DPYQQQIAVS AIESHQHMQQ IMPGAYMHSP LQLVPQPLNV VTAAPAILDS AYSDGHNTSP 240 MVSPTSDSQT PGRKRGIPGD VPNKFVERRQ KRMIKNRESA ARSRARKQAY TNELENKVSR 300 LEEENERLKK QKELDMLLCS VALPEPKYQL RRTCSAAF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 118 | 125 | GRRRRERQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi2g53060.5.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014754826.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Refseq | XP_014754827.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 5e-78 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A0Q3KGN7 | 0.0 | A0A0Q3KGN7_BRADI; Uncharacterized protein | ||||
STRING | BRADI2G53060.1 | 0.0 | (Brachypodium distachyon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 1e-75 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Bradi2g53060.5.p |
Entrez Gene | 100827454 |
Publications ? help Back to Top | |||
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