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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi2g21197.1.p | ||||||||
Common Name | BRADI_2g21197, LOC100823248 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 222aa MW: 23943.8 Da PI: 6.3045 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.2 | 4.8e-10 | 79 | 123 | 6 | 50 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++rr NReA r++R++Kka+ + Lee+v +L a N++L +l+ Bradi2g21197.1.p 79 KTRRPLGNREAVRKYREKKKARAAFLEEEVRKLRAANQQLLRRLQ 123 7899999*********************************99886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.0E-10 | 70 | 141 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.691 | 76 | 123 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-14 | 76 | 142 | No hit | No description |
Pfam | PF07716 | 2.7E-12 | 77 | 123 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.06E-7 | 79 | 124 | No hit | No description |
CDD | cd14686 | 1.24E-11 | 79 | 132 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MDDGVDLPSQ FLFSHPEPEM PGAFDDLLSN NASTSSCSHT HTCNAPGPSA AMHSHTCQHT 60 HTKVFATGSE DDDGNPAAKT RRPLGNREAV RKYREKKKAR AAFLEEEVRK LRAANQQLLR 120 RLQGHGALEA EVVRLRSLLP DVRAKIDAEV AVPVAVTPFQ KMPLQCSVGS VVCSDRPALC 180 FNGNSEAGAW EESSRPAAAG CRFEEDGNGG VAREIDVLEQ I* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi2g21197.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003566090.1 | 1e-163 | basic leucine zipper 23 | ||||
TrEMBL | A0A2K2D9N7 | 1e-162 | A0A2K2D9N7_BRADI; Uncharacterized protein | ||||
STRING | BRADI2G21197.1 | 1e-163 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3831 | 36 | 75 | Representative plant | OGRP1970 | 15 | 36 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16770.1 | 2e-19 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Bradi2g21197.1.p |
Entrez Gene | 100823248 |