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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Bradi2g05794.1.p |
| Common Name | BRADI_2g05794, LOC106865987 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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| Family |
Dof |
| Protein Properties |
Length: 243aa MW: 25263 Da PI: 9.3134 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bradi2g05794.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 118.2 | 3.2e-37 | 36 | 91 | 3 | 58 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrkn 58
+ l+cprC+st+tkfCyynny+l+qPr+fCk+CrryWt GGalrnvPvGg++r +
Bradi2g05794.1.p 36 AERLACPRCESTDTKFCYYNNYNLQQPRHFCKGCRRYWTVGGALRNVPVGGATRSK 91
67899************************************************986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MVLITAMDHQ QLAEEAAAAE GMVVRTSAAA AAGRPAERLA CPRCESTDTK FCYYNNYNLQ 60
QPRHFCKGCR RYWTVGGALR NVPVGGATRS KAGLVPASRR KRSSSSNSHH AAPAPPMASL 120
PVPVPAPVRP LSVSAPLPLP LLPPAPGTMQ AYELSFIPAG LQLHAASMVD PDRRLLDLGG 180
SFSSLLAPPP PQPPLHFGGF LLGGGGSGSA GLAHAPAGLQ QQPVSQALPE GFWGMGWPDL 240
SI*
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP002537 | 2e-53 | AP002537.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0001B06. |
| GenBank | AP002746 | 2e-53 | AP002746.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0671B11. |
| GenBank | AP014957 | 2e-53 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012609 | 2e-53 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
| GenBank | GQ183547 | 2e-53 | GQ183547.1 Oryza sativa Japonica Group Dof-type zinc finger protein 18 gene, partial cds. |
