![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Bradi1g53656.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 103aa MW: 10955.3 Da PI: 6.9559 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 28.3 | 4.9e-09 | 16 | 63 | 6 | 50 |
NAM 6 rFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.kk 50 F+P+ e+v+++L + ++g++ +e+ i++vdiy++eP+dL ++ Bradi1g53656.1.p 16 SFNPSPVEVVTHFLPRLISGEPlpRGAEHLIHRVDIYNHEPKDLApAT 63 7*********************53333456**************6333 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.01E-7 | 16 | 63 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 103 aa Download sequence Send to blast |
MEEAEAELGE VFYLCSFNPS PVEVVTHFLP RLISGEPLPR GAEHLIHRVD IYNHEPKDLA 60 PATASSSRSP NARKGAAPGQ RASPAPAPGQ SRRQGTSTMN PV* |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Bradi1g53656.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010233490.1 | 5e-34 | uncharacterized protein LOC104583318 | ||||
TrEMBL | A0A2K2DR93 | 6e-68 | A0A2K2DR93_BRADI; Uncharacterized protein | ||||
STRING | BRADI2G46980.1 | 2e-33 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1832 | 27 | 99 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Bradi1g53656.1.p |