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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Bradi1g47900.2.p |
| Common Name | BRADI_1g47900, LOC100836102 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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| Family |
GRAS |
| Protein Properties |
Length: 471aa MW: 51260.3 Da PI: 6.7542 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bradi1g47900.2.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 357.8 | 1.6e-109 | 65 | 443 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
lv+ L++cA a+++gd a + La+ ++l p+ + + R++++f+ ALa rl++ +++ +++pps++s++ ++ ++ f+++ P
Bradi1g47900.2.p 65 LVHILVTCAAAIQAGDYGVAVNNLAEAHTLlatTIPTSSGIGRVTSHFATALAYRLFSASPH--SSMPPSSSSPSPNNQAGEQYRQFYDMVPH 155
689***********************99997545577799******************5555..5688888888889999999********** PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
lkf+h++aNqaIlea++g+++vHiiD+ i+ GlQW++L+qa++ +++gpps+RiTgvg+ +g ++ ++e+g L++ A+ l+vpf+f+ +++
Bradi1g47900.2.p 156 LKFAHFAANQAILEAFQGHDQVHIIDLAIMRGLQWLPLIQAFSLQSGGPPSIRITGVGPTPTGPHDDIQEVGLLLTEHARVLNVPFSFHSVTC 248
***********************************************************8888****************************** PP
GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsles....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
++le l+++++++ + Ea+a+n+++qlhrll ++ + + ++d+vL + ++Pkv+++veqeadhn+++++erf++al yy + fds+e
Bradi1g47900.2.p 249 DSLEGLKPWMFHLIHSEAVAINSIFQLHRLLGDPDAASTslppPIDTVLGWITAMRPKVFTIVEQEADHNKPELVERFTNALFYYGVAFDSME 341
*******************************6654443334449************************************************* PP
GRAS 273 aklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkd 364
a +pr + ++ ++ l+rei ++v++eg+ r+erhetl+ Wr rl++aG+ +vpl+ ++ a++llr +++ gy+v e+ + l+l W++
Bradi1g47900.2.p 342 AIVPRSQaGTAGLAAEAHLQREIFDIVCNEGSGRVERHETLQCWRGRLRRAGLAQVPLGPNNLRHASMLLRIFSGAGYHVMERGDGLMLAWHG 434
*****9986666666666*************************************************************************** PP
GRAS 365 rpLvsvSaW 373
+pL+svS+W
Bradi1g47900.2.p 435 NPLFSVSVW 443
********* PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MRNFLLGWPS MGPANSSLLT GTVPSPSTQA VATTNTNNRV DPPSTHASHH LHPAMSLHEH 60
AAIRLVHILV TCAAAIQAGD YGVAVNNLAE AHTLLATTIP TSSGIGRVTS HFATALAYRL 120
FSASPHSSMP PSSSSPSPNN QAGEQYRQFY DMVPHLKFAH FAANQAILEA FQGHDQVHII 180
DLAIMRGLQW LPLIQAFSLQ SGGPPSIRIT GVGPTPTGPH DDIQEVGLLL TEHARVLNVP 240
FSFHSVTCDS LEGLKPWMFH LIHSEAVAIN SIFQLHRLLG DPDAASTSLP PPIDTVLGWI 300
TAMRPKVFTI VEQEADHNKP ELVERFTNAL FYYGVAFDSM EAIVPRSQAG TAGLAAEAHL 360
QREIFDIVCN EGSGRVERHE TLQCWRGRLR RAGLAQVPLG PNNLRHASML LRIFSGAGYH 420
VMERGDGLML AWHGNPLFSV SVWHVMEEEL EDNKNNVVRH VTTGAMLSMQ *
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