PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bradi1g30750.1.p

Common Name

BRADI_1g30750, LOC100837633

Organism

Brachypodium distachyon

Taxonomic ID

15368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium

Family

bZIP

Protein Properties

Length: 274aa MW: 28227.6 Da PI: 9.4656

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bradi1g30750.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.7	5.9e-09	158	205	16	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 16 AArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 AA R RKk+++ e ++ v +L aeN+ L++e+e+l+ +++l e+ Bradi1g30750.1.p 158 AAPGPRSRKKMRLPEVQQLVRSLAAENDGLREEVESLQRACSALSREN 205 666669************************************998876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	8.7E-6	158	202	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence Send to blast
MAEVNEEESC LAVLAEAAGI ICSLRAGDLA GWTPPWTTGP TAEALVGPTK EEMGAWPAVT 60 RGKRSRSSRG SGSAAAKVGR RRARGSPASP LDYSAASGSG SGVSTSGGED GAVFCSPPAP 120 AAAASAAAVP QSVPTTAATA SSAKVCSAGV RRPPPRPAAP GPRSRKKMRL PEVQQLVRSL 180 AAENDGLREE VESLQRACSA LSRENGTLET RLEHSSSKRK RTVSEEEDRP RQRKPMLQQL 240 GQHAAEHRGA REGFVLPDLN IPAAAPDDVG SAP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	162	168	RSRKKMR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Bradi1g30750.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003560357.1	0.0	trinucleotide repeat-containing gene 18 protein
TrEMBL	I1GVI6	0.0	I1GVI6_BRADI; Uncharacterized protein
STRING	BRADI1G30750.1	0.0	(Brachypodium distachyon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51

Link Out ? help Back to Top
Phytozome	Bradi1g30750.1.p
Entrez Gene	100837633