PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g29920.2.p
Common NameBRADI_1g29920, LOC100843849
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 151aa    MW: 16568.8 Da    PI: 9.2699
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g29920.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.41e-1581134359
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                       e++r+ r+++NRe+A rsR+RK+a++eeLe++v  L   N +Lk   ++ k+eva+l
  Bradi1g29920.2.p  81 EDRRTVRMMRNRESALRSRARKRAYVEELEKEVRRLVDDNLKLK---KQCKEEVAAL 134
                       799*************************************9999...8888888766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-1079140IPR004827Basic-leucine zipper domain
PfamPF001704.0E-1281128IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.51981126IPR004827Basic-leucine zipper domain
CDDcd147079.52E-1883129No hitNo description
SuperFamilySSF579594.25E-1183129No hitNo description
Gene3DG3DSA:1.20.5.1707.1E-1383132No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MASFGGQYVG TGAWMREPES PQLSLMSGCS SLFSISVLRD GDDLGGGVRS LPATPVSLAG  60
FVGAGDEVEM MDHLRQGSGD EDRRTVRMMR NRESALRSRA RKRAYVEELE KEVRRLVDDN  120
LKLKKQCKEE VAALVLPSKS SLRRTSSTQF *
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g29920.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2490125e-46AK249012.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf15j05, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003563257.11e-103ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A2K2DM031e-104A0A2K2DM03_BRADI; Uncharacterized protein
STRINGBRADI1G29920.11e-102(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.13e-10bZIP family protein