![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Bradi1g22907.1.p |
Common Name | BRADI_1g22907, LOC100828968 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family |
GRAS |
Protein Properties |
Length: 486aa MW: 52102.2 Da PI: 6.3388 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bradi1g22907.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Bdi&pid=Bradi1g22907.1.p) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 286 | 1.1e-87 | 72 | 482 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalkl..fsevsPi 90
++lL++cA a++++d++l+q++L+ l+++a dgd++qRl+a f+ AL +r +r ++ +ka+++ ++ +++++a++l f++++P+
Bradi1g22907.1.p 72 EQLLVHCASAIEANDATLTQQILWVLNNIAPADGDSTQRLTAAFLCALVSRASR--TGACKAVTAAVAAAVAveDVHRFTAVELagFVDLTPW 162
79****************************************************..666666655544444422444555555589******* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...........skeeleetgerLakfAeel 172
++f++++aN aIlea+eg vH++D++ ++++Q p+L++ LasR+egpp lR+T+ + ++++ +++ee+g +L +fA++
Bradi1g22907.1.p 163 HRFGYMAANAAILEAAEGFPVVHVVDLSTTHCMQIPTLIDLLASRAEGPPILRLTVADVSSNSssssssspppvLDTSYEELGAKLVSFARSR 255
*******************************************************98876666779999998887899*************** PP
GRAS 173 gvpfefnvl.......vakrledleleeLrvkp....gEalaVnlvlqlhrll...................desvsleserdevLklvksls 235
+v+++f+v+ a+ l++l++++L v+ Eal++n+++ lh ++ +++vsl r+ +Lk ++sl
Bradi1g22907.1.p 256 NVSMDFRVVrtspadaFASLLDTLRMQQLLVSDssscSEALVINCHMLLHAVPdetagsvmstltagllpqqQQPVSL---RTMLLKSLRSLD 345
*********999988878889999*****98888999********************************744444444...66********** PP
GRAS 236 PkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpv 327
P +vv++e++ad ++ + + r+ a+++ + +d++++ lp++ +r+++E+e +g++++nv+a+eg +r+er+e ++W +r++ aGF++v
Bradi1g22907.1.p 346 PALVVIAEEDADFTACDVVGRLRAAFNFLWIPYDAVDTFLPKQGsAQRRWYEAE-VGWKVENVLAQEGVARVERQEGRARWGQRMRGAGFRAV 437
*****************************************986599999**99.************************************** PP
GRAS 328 plsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
++e+aa +++++l++++ g+ ++ e++ l+l+Wk++++v++SaW
Bradi1g22907.1.p 438 GIGEEAAGEVRTMLNEHA-AGWGMKREDDDLLLTWKGHNVVFASAW 482
******************.889999********************* PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 486 aa
Download sequence Send
to blast |
MMQFTHAAVT APPLHHHHHH HGHHVPNNAA HGLGLGLLLD VGTPRPWPGT TTPTTASSKI 60 SLGNLNSAGC MEQLLVHCAS AIEANDATLT QQILWVLNNI APADGDSTQR LTAAFLCALV 120 SRASRTGACK AVTAAVAAAV AVEDVHRFTA VELAGFVDLT PWHRFGYMAA NAAILEAAEG 180 FPVVHVVDLS TTHCMQIPTL IDLLASRAEG PPILRLTVAD VSSNSSSSSS SSPPPVLDTS 240 YEELGAKLVS FARSRNVSMD FRVVRTSPAD AFASLLDTLR MQQLLVSDSS SCSEALVINC 300 HMLLHAVPDE TAGSVMSTLT AGLLPQQQQP VSLRTMLLKS LRSLDPALVV IAEEDADFTA 360 CDVVGRLRAA FNFLWIPYDA VDTFLPKQGS AQRRWYEAEV GWKVENVLAQ EGVARVERQE 420 GRARWGQRMR GAGFRAVGIG EEAAGEVRTM LNEHAAGWGM KREDDDLLLT WKGHNVVFAS 480 AWAPS*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |