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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Bostr.7867s1585.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
|
| Family |
MYB |
| Protein Properties |
Length: 321aa MW: 34816.7 Da PI: 7.4624 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bostr.7867s1585.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 62.3 | 1e-19 | 14 | 59 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEd+ll ++v+++G+++W++I++ ++ gR++k+c++rw +
Bostr.7867s1585.1.p 14 KGPWSPEEDDLLQRLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 59
79******************************.***********985 PP
|
| 2 | Myb_DNA-binding | 54 | 3.7e-17 | 68 | 110 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++++eEde +++a++++G++ W+tI+r ++ gRt++ +k++w++
Bostr.7867s1585.1.p 68 AFSQEEDETIIRAHARFGNK-WATISRLLN-GRTDNAIKNHWNST 110
79******************.*********.***********986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:0010200 | Biological Process | response to chitin |
| GO:0046686 | Biological Process | response to cadmium ion |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MSNSTTRKNT ERIKGPWSPE EDDLLQRLVQ KHGPRNWSLI SKSIPGRSGK SCRLRWCNQL 60
SPEVEHRAFS QEEDETIIRA HARFGNKWAT ISRLLNGRTD NAIKNHWNST LKRKCSVEGQ 120
SCDFGGNGGY DGNLGEEQPL KRTASGGGVS TGLYMSPGSP SGSDVSEQSS GQGQHVFKPT 180
VRSEVTASSP GEDPPTYLSL SLPWTETVRV NEAPQLNQNT VMDGGYTAEL FPVRKEEEVE 240
LEEEAKGISG GFGGEFMTVV QEMIRTEVRS YMADLQRGNV GGSGGGSGGG GGSCMPQSVN 300
SRRVGFREFI VNQIGIGKMK *
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AL161591 | 0.0 | AL161591.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87. |
| GenBank | AY063912 | 0.0 | AY063912.1 Arabidopsis thaliana putative myb-related protein (At4g37260) mRNA, complete cds. |
| GenBank | AY091267 | 0.0 | AY091267.1 Arabidopsis thaliana putative myb-related protein (At4g37260) mRNA, complete cds. |
| GenBank | AY519613 | 0.0 | AY519613.1 Arabidopsis thaliana MYB transcription factor (At4g37260) mRNA, complete cds. |
| GenBank | CP002687 | 0.0 | CP002687.1 Arabidopsis thaliana chromosome 4 sequence. |
| GenBank | Z99707 | 0.0 | Z99707.1 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1. |
