 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Bostr.5022s0106.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
|
| Family |
GeBP |
| Protein Properties |
Length: 300aa MW: 32970.4 Da PI: 8.9467 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bostr.5022s0106.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 50.5 | 5.8e-16 | 153 | 191 | 2 | 40 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyef 40
lfqr+wseeDeivlLq++idf+++tgks+++d+++f +
Bostr.5022s0106.1.p 153 LFQRVWSEEDEIVLLQAMIDFRSNTGKSVYEDMNNFLKR 191
69**********************************876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MAKKNQSQHL VTPSTVKKPL KVASTSKKPA KKLSEVVSTA KNKKQPEPMK IPPPESSSDE 60
EEEDEPSNEV APSPSASAPV VAVTATESSD SVSESETENE SDSETEPATT KTPLPAASAP 120
VVAITSIQSS APSTEVSKRS KTERGTETAK NALFQRVWSE EDEIVLLQAM IDFRSNTGKS 180
VYEDMNNFLK RNKYVGYWKT CVEPSFTKPH DKKCWELAKI IWPTDVDKKK IKVENDIGGA 240
KYVKEVWRSV PVKAKKKVEE KWKSLKANEL QGILIKSELL KEVSSLIAKE VSSPIPKSD*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT4G00610.1 | 8e-21 | DNA-binding storekeeper protein-related transcriptional regulator |
