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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Bostr.3751s0030.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
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Family |
M-type_MADS |
Protein Properties |
Length: 314aa MW: 35833.6 Da PI: 8.8346 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bostr.3751s0030.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 74.9 | 6.3e-24 | 5 | 53 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
r++++s +++++s+R+++++KKA+ELS+LC++ev+vi ++++g+l+++
Bostr.3751s0030.1.p 5 RSSSYSLASTSLSNRLKTVFKKASELSILCEVEVCVIHYGPDGELKTWT 53
89**********************************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MRSSRSSSYS LASTSLSNRL KTVFKKASEL SILCEVEVCV IHYGPDGELK TWTKEKEKVK 60 DMALRYSQLT EALRRKKSVN LYGFLNKKKI KNLKNLNKEK KTSLKKVNGL KYPISDHYSS 120 DQVSQLIQSL ELNFSKFQER LLFVESQKYK ETKLDHQSLA SSTLNHQHLQ TQSLNPSQFS 180 LIMYNHGDNT FSQIPVSASN FNQDFLALLQ ESELKKKQEL CGYDQNMCMS DITNNNFQHP 240 CISNKEAVQE SANNFGLNQL MQKEFYGCDQ NMCMGNINSN NFQHPCVSEN YSAVQESVNN 300 IGLNQLMQHG LYG*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |