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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Bostr.3751s0025.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
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Family |
M-type_MADS |
Protein Properties |
Length: 157aa MW: 18013.9 Da PI: 10.4518 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bostr.3751s0025.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 71.7 | 6.2e-23 | 5 | 54 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
r++++s +++++s+R+++++KKA LS+LC+++v+vi+++++g l+++++
Bostr.3751s0025.1.p 5 RSSSYSLASTSLSNRLKTVFKKADKLSILCEVDVCVIYYGPDGGLKTWPK 54
89**********************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 157 aa
Download sequence Send
to blast |
MRTSRSSSYS LASTSLSNRL KTVFKKADKL SILCEVDVCV IYYGPDGGLK TWPKEEEKVK 60 DMALRYSQLT EALRCKKSVN LYGFLNKKKI KALKNLNKER KTTGPKKVNG LKYPISDHYS 120 SDQVSQLIQS LELNFSKFQE RLRFVESQKH KEINRV*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |