 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Bostr.28243s0041.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
|
| Family |
GeBP |
| Protein Properties |
Length: 202aa MW: 23112 Da PI: 9.9379 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bostr.28243s0041.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 37.4 | 7.2e-12 | 92 | 136 | 51 | 97 |
DUF573 51 ksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
+q+++Kir LK+K+ +k+kk e+sf+++h +++f++sk iW+
Bostr.28243s0041.1.p 92 PRQFTSKIRCLKDKYVRKRKK--GAAEKSFANAHVHNCFKISKVIWE 136
57*******************..888999*****************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 202 aa
Download sequence Send
to blast |
MAKKNKRSRP ENNHSKPENK RLKPEEDPST VKRRLQLLED PPTKKRSPQL LENLLTESSG 60
DDEEEGQESG SSSEEEGQES GSSSEEEEQK DPRQFTSKIR CLKDKYVRKR KKGAAEKSFA 120
NAHVHNCFKI SKVIWESTKV GDWFVNSSLV GAIARFGIGE DVMKQRWSMV SMKTKKKLEN 180
KFKLLQDEAS EYLSLRRSFF A*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 104 | 110 | KYVRKRK |
| 2 | 107 | 111 | RKRKK |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G01370.1 | 1e-34 | DNA-binding storekeeper protein-related transcriptional regulator |
