 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Bostr.25993s0515.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
|
| Family |
G2-like |
| Protein Properties |
Length: 270aa MW: 30404.4 Da PI: 7.9709 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bostr.25993s0515.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 99.8 | 1.8e-31 | 53 | 106 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH +Fv+av++LGG+++AtPk +l++m++kgL+++hvkSHLQ+YR+
Bostr.25993s0515.1.p 53 PRLRWTPDLHLSFVRAVQRLGGPQRATPKLVLQMMNLKGLSIAHVKSHLQMYRS 106
8****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MAGTSSPGIC STWLDLNREE TVEKNNEEES SVEDEDQVTS SNNVRQYVRS NMPRLRWTPD 60
LHLSFVRAVQ RLGGPQRATP KLVLQMMNLK GLSIAHVKSH LQMYRSKKLE PSARHEIGAF 120
TCGQRSYLMD MIDSGCIPYG GDLRHVYNSK TIPSRVLNQD AVITDLGDNF LMRPSSWLSE 180
LYRNERDSIE NKTLPLLEIR KTVNEKRVRD EEVSSVKRLK SISGGGIQLP EFGNCRQKPT 240
DDINTMLSLS LFSTSSGDRN IASSDIVER*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 4e-18 | 54 | 108 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 4e-18 | 54 | 108 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 4e-18 | 54 | 108 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 4e-18 | 54 | 108 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY074640 | 0.0 | AY074640.1 Arabidopsis thaliana F14N22.7/F14N22.7 mRNA, complete cds. |
