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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Bostr.25375s0045.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
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Family |
M-type_MADS |
Protein Properties |
Length: 368aa MW: 41211.5 Da PI: 10.1063 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bostr.25375s0045.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 67.9 | 9.8e-22 | 39 | 82 | 7 | 50 |
HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
s + ++f++Rr++++KKA ELSvLC++ev+vi ++s g+l++++
Bostr.25375s0045.1.p 39 SSKATSFIRRRKTVFKKALELSVLCGIEVCVICYGSGGELKTWP 82
6789***************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 368 aa
Download sequence Send
to blast |
MVSSSSCSPS SSSSTKKKTT NSSQIQQTLS KKPNSASFSS KATSFIRRRK TVFKKALELS 60 VLCGIEVCVI CYGSGGELKT WPEDREKVKG MARRYGALSE TKRRKGSKKK KKVRRVFKVK 120 YPVLDPRFDN YSVEQLTGMI QSLERNLTRI QHRIHAVVGG QGQKKIQYRN MGNQELMMTT 180 TMNHLQQQSN QVSMFLFDHG NGNISQIPVS AYASALNQGQ SLPPIPPELM IYPNSDVGNY 240 SGSLGVQGTG INGFQNMNML TCNNINNVND FSKQIDQNSN EFENTNMYIR NNFNVEDYSV 300 LLGVQGTVIN ELQSMNMHDY NNNSVNANVL SHQLVQFPTQ QQHRAFNSDQ SGNNNIWSLY 360 DLSQSIL*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |