 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Bostr.20903s0171.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
|
| Family |
FAR1 |
| Protein Properties |
Length: 256aa MW: 29344.1 Da PI: 6.5137 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bostr.20903s0171.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 94.2 | 1.5e-29 | 89 | 176 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
fYn+YA++vGF +r+sk ++s+++g+ + r++vC+keg+r ++k++ k r+raetr+gC+a++ ++ke++gkw++tk+++eHnH+l+
Bostr.20903s0171.2.p 89 FYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSKRD--KVIRQRAETRVGCRAMILIRKENSGKWVITKFVKEHNHPLM 175
9******************************************999..999************************************98 PP
FAR1 91 p 91
p
Bostr.20903s0171.2.p 176 P 176
6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MMMGIPVELE VTTVENHNEM GESSGQAMIE QDDDNHNEMG ENSGQAMIEQ DEKVSPDSIP 60
LAVADMAEVQ GDEPYVGQEF ESEAAAHGFY NAYATKVGFV IRVSKLSRSR HDGSPIGRQL 120
VCNKEGYRLP SKRDKVIRQR AETRVGCRAM ILIRKENSGK WVITKFVKEH NHPLMPGRVR 180
RGCIYDQYPN EHDKIQELMQ QLAAEKKRAA TYKRHLEMLF EQIEQHNEIL SKRIQHIVDN 240
VRNLEQRDHQ QNHQV*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY058089 | 0.0 | AY058089.1 Arabidopsis thaliana AT3g59470/T16L24_20 mRNA, complete cds. |
| GenBank | AY143081 | 0.0 | AY143081.1 Arabidopsis thaliana At3g59470/T16L24_20 mRNA, complete cds. |
